AI-ACCELERATED DRUG DISCOVERY
Discovery of highly selective inhibitors for mAChR3
Targeting candidates to treat bronchial asthma and CODP

Background

  • Hyperactivity of muscarinic acetylcholine receptor mAChR3 is involved in pathogenesis of Bronchial asthma and Chronic obstructive pulmonary disease (COPD) by causing abnormal airway contraction and mucus secretion.
  • Current non-selective therapeutic drugs exhibit severe adverse effects.
  • There's a pressing need for more selective drugs against COPD.
  • This study aims at discovering highly selective inhibitors of mAChR3 with minimal side effects
mAChR3 structure

Methodology

  • Full-length mAChR3 model was obtained by homology modeling.
  • Using the ICM Pocket Finder algorithm orthosteric binding site has been identified.
  • Molecular docking of the pre-selected focused library was performed.
  • Top 2% of compounds were selected by docking score followed by the human triage by visual inspection.
  • 23 candidates were selected.
  • The reaction of tracheal preparations to the application of acetylcholine (100 uM) was used to test the potency of selected compounds.

Results

  • 3 compounds appeared to be the most promising.
  • The compound THPT-1 demonstrated the IC50 of 162 nM.
  • Selectivity was assessed by testing the impact of THPT-1/4 on mAChR2, nicotinic cholinergic and adrenergic receptors.
  • No off-target effects were detected.
  • THPT-1 shares the binding mode with highly active non-selective antagonist of mAChRs tiotropium, which explains its high activity.
  • The selectivity can be explained by additional interactions of THPT-1 with the binding pocket.
  • 7 derivatives of THPT-1 were selected for further evaluation.
  • The compliance of the compounds with the binding mode was enforced.
  • 3 compounds were active and selective.
  • The best one THPO-4 had the highest activity with IC50 of 3.09 nM.
Structure of THPT-1 and its binding mode with mAChR3
ACh concentration effect in the presence of THPT-1 in rat trachea
Shield plot for the effect of THPT-1
ACh conc.-effect plot
Shield plot of THPT-4