AI-ACCELERATED DRUG DISCOVERY
Targeting difficult PPI’s in TROP2, CD47, CD3 and PD-L1
Designing PPI modulators for crucial targets in cancer treatment

Background

  • Trop2, CD47, and CD3 are critical targets in immuno-oncology, validated by antibodies but lacking small molecule ligands and biding pockets.

Methodology

  • PPI targeting workflow of Receptor.AI.
  • The stock chemical space of 4.'5 M compounds.
  • Binding assessment as a first stage of the project.

Results

  • Trop2
    • 15 preliminary hits obtained through BLI assays.
    • 7 hits confirmed through Differential Scanning Fluorimetry (DSF) assay.
    • Structure–Activity Relationship (SAR) study showed that 3 classes of inhibitors are assessed.
    • Preliminary hits obtained through BLI assays.
    • Hits TP2-05 and TP2-31 were confirmed by DSF assay.
  • CD47
    • 7 preliminary hits obtained through BLI assays.
    • All preliminary hits confirmed through Differential Scanning Fluorimetry (DSF) assay.
    • Structure–Activity Relationship (SAR) study showed that 2 classes of inhibitors are assessed.
    • Homogeneous Time-Resolved Fluorescence (HTRF) screening
(PPI destabilization assessment) demonstrated 7/25 (2nd batch) 
hits (3 lead CD47/SIRPa PPI interface disruptors).
  • PD-L1
    • Homogeneous Time-Resolved Fluorescence (HTRF) screening
(PPI destabilization assessment) demonstrated 12/23 
PD1-PDL1 PPI interface disruptors.
  • CD47
    • 3 preliminary hits obtained through BLI assays.
    • Differential Scanning Fluorimetry (DSF) assay revealed:
      • CD3-7 shows specificity to CD3 εδ,
      • CD3-15 shows specificity to CD3 εγ,
      • CD3-30 is bispecific.